NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
784.0 |
| Mean read quality |
9.5 |
| Median read length |
779.5 |
| Median read quality |
10.0 |
| Number of reads |
6.0 |
| Read length N50 |
872.0 |
| STDEV read length |
174.9 |
| Total bases |
4,704.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
6 (100.0%) 0.0Mb |
| >Q7 |
6 (100.0%) 0.0Mb |
| >Q10 |
3 (50.0%) 0.0Mb |
| >Q12 |
0 (0.0%) 0.0Mb |
| >Q15 |
0 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
10.7 (687) |
| 2 |
10.5 (557) |
| 3 |
10.0 (614) |
| 4 |
9.9 (945) |
| 5 |
9.1 (1029) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
1029 (9.1) |
| 2 |
945 (9.9) |
| 3 |
872 (9.0) |
| 4 |
687 (10.7) |
| 5 |
614 (10.0) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot