NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
966.1 |
| Mean read quality |
8.6 |
| Median read length |
802.0 |
| Median read quality |
9.2 |
| Number of reads |
9.0 |
| Read length N50 |
1,069.0 |
| STDEV read length |
433.3 |
| Total bases |
8,695.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
9 (100.0%) 0.0Mb |
| >Q7 |
9 (100.0%) 0.0Mb |
| >Q10 |
2 (22.2%) 0.0Mb |
| >Q12 |
0 (0.0%) 0.0Mb |
| >Q15 |
0 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
11.1 (802) |
| 2 |
10.5 (568) |
| 3 |
9.9 (579) |
| 4 |
9.5 (1069) |
| 5 |
9.2 (1663) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
1728 (8.2) |
| 2 |
1663 (9.2) |
| 3 |
1069 (9.5) |
| 4 |
1054 (7.4) |
| 5 |
802 (11.1) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot