NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
941.2 |
| Mean read quality |
9.0 |
| Median read length |
742.0 |
| Median read quality |
9.5 |
| Number of reads |
32.0 |
| Read length N50 |
1,009.0 |
| STDEV read length |
491.1 |
| Total bases |
30,118.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
32 (100.0%) 0.0Mb |
| >Q7 |
32 (100.0%) 0.0Mb |
| >Q10 |
10 (31.2%) 0.0Mb |
| >Q12 |
0 (0.0%) 0.0Mb |
| >Q15 |
0 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
11.1 (1446) |
| 2 |
11.0 (605) |
| 3 |
11.0 (837) |
| 4 |
10.7 (880) |
| 5 |
10.6 (1071) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
2891 (9.1) |
| 2 |
1987 (10.1) |
| 3 |
1603 (9.0) |
| 4 |
1465 (9.3) |
| 5 |
1446 (11.1) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot