user_genome	classification	closest_genome_reference	closest_genome_reference_radius	closest_genome_taxonomy	closest_genome_ani	closest_genome_af	closest_placement_reference	closest_placement_radius	closest_placement_taxonomy	closest_placement_ani	closest_placement_af	pplacer_taxonomy	classification_method	note	other_related_references(genome_id,species_name,radius,ANI,AF)	msa_percent	translation_table	red_value	warnings
bin.0	d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli	GCF_003697165.2	95.0	d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli	98.38	0.887	GCF_003697165.2	95.0	d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli	98.38	0.887	d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__	taxonomic classification defined by topology and ANI	topological placement and ANI have congruent species assignments	GCF_000194175.1, s__Escherichia coli_F, 95.0, 94.99, 0.811; GCF_002965065.1, s__Escherichia sp002965065, 95.0, 93.38, 0.663; GCF_004211955.1, s__Escherichia sp004211955, 95.0, 91.71, 0.716; GCF_005843885.1, s__Escherichia sp005843885, 95.0, 91.63, 0.74; GCF_029876145.1, s__Escherichia ruysiae, 95.0, 91.54, 0.725; GCF_011881725.1, s__Escherichia coli_E, 95.0, 90.9, 0.715; GCF_014836715.1, s__Escherichia whittamii, 95.0, 90.89, 0.728; GCF_000026225.1, s__Escherichia fergusonii, 95.0, 90.82, 0.519; GCF_002900365.1, s__Escherichia marmotae, 95.0, 90.4, 0.705; GCF_000759775.1, s__Escherichia albertii, 95.0, 89.55, 0.617	74.48	11	N/A	N/A
